Next-Generation Sequencing of the Bacterial 16S rRNA Gene for Forensic Soil Comparison: A Feasibility Study

• NCJ Number: 250030
• Journal: Journal of Forensic Sciences Volume: 61 Issue: 3 Dated: February 2016 Pages: 607-617
• Author(s): E. M. Jesmok; J. M. Hopkins; D. R. Foran
• Date Published: February 2016
• Length: 11 pages
• Grant Number(s): 2013-R2-CX-K010
• Sponsoring Agency: National Institute of Justice (NIJ)
• Publication Format: Article; Document (Online)
• Publication Type: Research (Applied/Empirical); Report (Study/Research); Report (Grant Sponsored); Program/Project Description
• Language: English
• Country: United States of America
• Note: Presented at the 67th Annual Meeting of the American Academy of Forensic Sciences, February 16–20, 2015, in Orlando, FL.

Annotation

This study examined the utility of soil bacterial profiling via next-generation sequencing of the 16S rRNA gene in order to associate soils with their place of origin.

Abstract

Soil has the potential to be valuable forensic evidence linking a person or item to a crime scene; however, there is no established soil individualization technique. Soil samples were collected from ten diverse and nine similar habitats over time, and within three habitats at various horizontal and vertical distances. Bacterial profiles were analyzed using four methods: abundance charts and nonmetric multidimensional scaling provided simplification and visualization of the massive datasets, potentially aiding in expert testimony, while analysis of similarities and k-nearest neighbor offered objective statistical comparisons. The vast majority of soil bacterial profiles (95.4 percent) were classified to their location of origin, highlighting the potential of bacterial profiling via next-generation sequencing for the forensic analysis of soil samples. (Publisher abstract modified)